PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021287475.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | YABBY | ||||||||
Protein Properties | Length: 161aa MW: 18428.9 Da PI: 10.0595 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 141.7 | 7.8e-44 | 6 | 138 | 24 | 170 |
YABBY 24 vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvpp.vir 117 v+vP +slf++vtvrCG Ct+l svnla++ +a ++ + ++++++ s+s+ ++kl++ + + + + v+r XP_021287475.1 6 VNVPCSSLFETVTVRCGQCTNLCSVNLATSFPSRAGKDI----------QAPSYTSSEYRIDL-----GSSSRCKNKLPKRATTVNTTPERvVNR 85 9**************************998877777663..........22222222222222.....22233333333333333322222389* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 PP+kr r+Ps yn+fikeeiqrik +nPdi+hreafs+aaknWa fP+ihfgl XP_021287475.1 86 PPDKRHRAPSLYNQFIKEEIQRIKLNNPDITHREAFSTAAKNWARFPHIHFGL 138 ***************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MKRWPVNVPC SSLFETVTVR CGQCTNLCSV NLATSFPSRA GKDIQAPSYT SSEYRIDLGS 60 SSRCKNKLPK RATTVNTTPE RVVNRPPDKR HRAPSLYNQF IKEEIQRIKL NNPDITHREA 120 FSTAAKNWAR FPHIHFGLML ETDNQPKLND DSTEHFQQLL K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-65 | YABBY family protein |