PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021287082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SBP | ||||||||
Protein Properties | Length: 382aa MW: 42135.8 Da PI: 7.7551 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.3 | 7.9e-42 | 89 | 165 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ XP_021287082.1 89 CLVDGCNSDLSSCRDYHRRHKVCELHSKTPQVMINGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 165 **************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence |
MDWNLKATSW DLTELVNEAV PTIAAVNGSS NYGVPRNEGD FSVDLKLGQV GNTGEESMNK 60 WKEPGELKME SSPSKRARAT NNGTHQVSCL VDGCNSDLSS CRDYHRRHKV CELHSKTPQV 120 MINGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPQPDPLSR SGSYFSNYQG 180 TQMLPFSNLP VYPSTTVVKP TWPGVTDSGT DSRHLNQQQQ LHSPEKQNLV LGSSSSNYRG 240 GKQFMFLQGE NNTPQNQTLP EASVCQPLLR ATPFSEGSGG SHNVFWDRST TPVQDSDCAL 300 SLLSSPQTQT SGISLSSMVQ PNSFPSVQPL GPSLQNHIIE PMDSVVVANG RDTAVHCPGM 360 FHMGSGGSSG NEAPQTLPFH WQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 146 | 163 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 2e-72 | SBP family protein |