PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021287082.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SBP
Protein Properties Length: 382aa    MW: 42135.8 Da    PI: 7.7551
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021287082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.37.9e-4289165278
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     C v+gC++dls++++yhrrhkvCe hsk+p+v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+
  XP_021287082.1  89 CLVDGCNSDLSSCRDYHRRHKVCELHSKTPQVMINGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 165
                     **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MDWNLKATSW DLTELVNEAV PTIAAVNGSS NYGVPRNEGD FSVDLKLGQV GNTGEESMNK  60
WKEPGELKME SSPSKRARAT NNGTHQVSCL VDGCNSDLSS CRDYHRRHKV CELHSKTPQV  120
MINGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPQPDPLSR SGSYFSNYQG  180
TQMLPFSNLP VYPSTTVVKP TWPGVTDSGT DSRHLNQQQQ LHSPEKQNLV LGSSSSNYRG  240
GKQFMFLQGE NNTPQNQTLP EASVCQPLLR ATPFSEGSGG SHNVFWDRST TPVQDSDCAL  300
SLLSSPQTQT SGISLSSMVQ PNSFPSVQPL GPSLQNHIIE PMDSVVVANG RDTAVHCPGM  360
FHMGSGGSSG NEAPQTLPFH WQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146163KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-72SBP family protein