PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24618.2 Da PI: 10.5885 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.7 | 1.5e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELS+LCdaeva++ifsstgk+y ++s XP_021286836.1 9 KRIENPTSRQVTFSKRRNGLLKKAFELSILCDAEVALLIFSSTGKVYQFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 65.7 | 1.7e-22 | 84 | 172 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++e ++ e++ Lk+ i++L++ + hl Ged+ sL +++L+qLe+qL+ + +++Rs+K +++ ++ l+++ kel+een++L+k+l+e XP_021286836.1 84 RTMEFWRSEIEELKRSINTLETRLTHLSGEDILSLGMRDLKQLERQLKIGAERVRSRKRRIVSDHATLLKRRHKELHEENTRLQKRLNE 172 56899*******************************************************************************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MGRGKVELKR IENPTSRQVT FSKRRNGLLK KAFELSILCD AEVALLIFSS TGKVYQFASH 60 DMDRSIGKYR SAVGLPDSSN PQFRTMEFWR SEIEELKRSI NTLETRLTHL SGEDILSLGM 120 RDLKQLERQL KIGAERVRSR KRRIVSDHAT LLKRRHKELH EENTRLQKRL NELRDGNLSS 180 TIVGENVCSK FQQRILQDEN LLKEPEKVSH YG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 4e-47 | MIKC_MADS family protein |