PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286563.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 519aa MW: 57962.8 Da PI: 4.6879

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286563.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	2.9e-30	249	308	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_021286563.1 249 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 308 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MGREERRMEI DLSLKIDAKE EEEEEEEEEE EEVEEEEKDV EDAKETMEED DNQDREVMTA 60 IAATGEVEDG APLEFSLQEN TKTEEMEMSR MKEENKVLRK VVEKTMQDYY DLQMKFAAIQ 120 QNNQKKDPQI FLSLSGNENS SQEQQANPRT LNVNNQKHGS PSQDDNDEEN ELGLSLRLQT 180 ISSQREIRQE DQKEDQRKEL ESQEITSNVA TVQNKLDQSH LPAITSHAAS PPNRKARVSV 240 RARCQTATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC LEDMSILITT 300 YEGTHNHPLP VGATAMASTA SAAAASFMLL DSSNPLSNGI PNITQATLPY QNPYLINSAN 360 PSNNVRNMTL NDPSKGIVLD LTNNHHFDHH QLPLTASSSS HSSAHQQAFP WMPSRLNYHN 420 ANPLPSNAFA TSRTNEREWK SDEDKSLAEN VTAIASDPKF RVAVAAAITS LINKESQTTH 480 PIPIASSFVG REGESGSSST NNWVLESLSG TGKPIQHSP

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MGREERRMEI DLSLKIDAKE EEEEEEEEEE EEVEEEEKDV EDAKETMEED DNQDREVMTA  60
IAATGEVEDG APLEFSLQEN TKTEEMEMSR MKEENKVLRK VVEKTMQDYY DLQMKFAAIQ  120
QNNQKKDPQI FLSLSGNENS SQEQQANPRT LNVNNQKHGS PSQDDNDEEN ELGLSLRLQT  180
ISSQREIRQE DQKEDQRKEL ESQEITSNVA TVQNKLDQSH LPAITSHAAS PPNRKARVSV  240
RARCQTATMN DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPG CPVRKQVQRC LEDMSILITT  300
YEGTHNHPLP VGATAMASTA SAAAASFMLL DSSNPLSNGI PNITQATLPY QNPYLINSAN  360
PSNNVRNMTL NDPSKGIVLD LTNNHHFDHH QLPLTASSSS HSSAHQQAFP WMPSRLNYHN  420
ANPLPSNAFA TSRTNEREWK SDEDKSLAEN VTAIASDPKF RVAVAAAITS LINKESQTTH  480
PIPIASSFVG REGESGSSST NNWVLESLSG TGKPIQHSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-77	WRKY family protein