PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WRKY | ||||||||
Protein Properties | Length: 524aa MW: 58503.5 Da PI: 4.6879 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.8 | 3e-30 | 254 | 313 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_021286562.1 254 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 313 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MGREERRMEI DLSLKIDAKE EEEEEEEEEE EEVEEEEKDV EDAKETMEED DNQDREVMTA 60 IAATGEVEDG APLEFSLQEN TKTEELSVLQ MEMSRMKEEN KVLRKVVEKT MQDYYDLQMK 120 FAAIQQNNQK KDPQIFLSLS GNENSSQEQQ ANPRTLNVNN QKHGSPSQDD NDEENELGLS 180 LRLQTISSQR EIRQEDQKED QRKELESQEI TSNVATVQNK LDQSHLPAIT SHAASPPNRK 240 ARVSVRARCQ TATMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS 300 ILITTYEGTH NHPLPVGATA MASTASAAAA SFMLLDSSNP LSNGIPNITQ ATLPYQNPYL 360 INSANPSNNV RNMTLNDPSK GIVLDLTNNH HFDHHQLPLT ASSSSHSSAH QQAFPWMPSR 420 LNYHNANPLP SNAFATSRTN EREWKSDEDK SLAENVTAIA SDPKFRVAVA AAITSLINKE 480 SQTTHPIPIA SSFVGREGES GSSSTNNWVL ESLSGTGKPI QHSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 1e-78 | WRKY family protein |