PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021286360.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 162aa    MW: 18778 Da    PI: 9.0247
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021286360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-3084141159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s+fp sYYrCt+++C+vkk+v+rs++d ++v++tYeg H+h+
  XP_021286360.1  84 LDDGYRWRKYGQKTVKNSKFP-SYYRCTHKECNVKKQVQRSSKDDEIVVTTYEGIHTHP 141
                     59*******************.9***********************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MENYHILFPD GSSASPSLLT MTNHRSYLQG NDVITTTKVG NQCEDLDAKD VSSESEVKVG  60
KKGDNKGMRK HKYAFQTRSQ VDILDDGYRW RKYGQKTVKN SKFPSYYRCT HKECNVKKQV  120
QRSSKDDEIV VTTYEGIHTH PVEKFSENFE QILRQMQTYN PL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.12e-48WRKY family protein