PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SRS | ||||||||
Protein Properties | Length: 210aa MW: 23093 Da PI: 8.8146 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 179.6 | 1.3e-55 | 11 | 143 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskk 98 g+ +CqdCGnqakk+Ca++RCRtCC+s+gf+C+thvkstWvpa++rr+r+qql++ ++ ++ + +++kr re+ s++ XP_021286348.1 11 GGPRCQDCGNQAKKNCAYMRCRTCCRSKGFECQTHVKSTWVPAYRRRQRHQQLSSVPQQ--HHLSVHNPKRLREN----------------PSST 87 6679*********************************************9999887443..33444555555543................2334 PP DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 le +lP+e+ s+a frcvrvss+dd+ +++aYqt v+i GhvfkGiLydqG++e XP_021286348.1 88 GLELGNLPAELTSPATFRCVRVSSIDDAADQYAYQTIVNIEGHVFKGILYDQGPAE 143 567778***********************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MMMMSQGAGF GGPRCQDCGN QAKKNCAYMR CRTCCRSKGF ECQTHVKSTW VPAYRRRQRH 60 QQLSSVPQQH HLSVHNPKRL RENPSSTGLE LGNLPAELTS PATFRCVRVS SIDDAADQYA 120 YQTIVNIEGH VFKGILYDQG PAEGHHHTVG ECSSRGTHQP NQINAAALTT ATMTTSTTSV 180 AAETLLPFAY ASPFNAFMSA GTQFFLHPKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19790.1 | 1e-58 | SRS family protein |