PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021286255.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WRKY | ||||||||
Protein Properties | Length: 324aa MW: 36938.8 Da PI: 10.2199 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 48.9 | 1.3e-15 | 94 | 145 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD y+Wr YG + rs+Y+C+++gCp++k v+rs d++++ei+ + +Hnh+ XP_021286255.1 94 DDAYTWRCYGI-----GNRRRSFYKCAHPGCPATKSVDRSL-DGQIIEIIHKARHNHP 145 8*********5.....3467*********************.***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MSVPMPMYGN NQQGTSIGRE ENNSADVCHL SQPSPSTIST TMSQLSANTL PTARLQAQSF 60 EEVAKQSQSK GNLQANYGNY CKQYSHLVKS RKSDDAYTWR CYGIGNRRRS FYKCAHPGCP 120 ATKSVDRSLD GQIIEIIHKA RHNHPESQLT RTSSLSAFSQ IIRASNHLTI KIPEQSYVTY 180 EGVPMDPEAA SVVLLRSVLD KEVGHSFVRR ESLEKLLQRR KERTVKTNSS NIYKVAHKTH 240 KEKRSKTSVL RFSTETTNFR EMVQRYTEVP KTTDFREMVP RYTEVPKTTN FREMVPRYTG 300 VPTKEVQEKR RMAELPRVGS LDLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13960.1 | 7e-17 | WRKY family protein |