PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021286073.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 410aa MW: 45727.1 Da PI: 7.9645

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021286073.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.5	6.2e-33	265	320	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_021286073.1 265 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 320 79****************************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a +qlGg t+k I + m+ g+t ++ks++qky+ XP_021286073.1 267 RRCWSPELHRRFVNALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 318 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MGSVPPELSL DLRPTFVPKT ISNFLKEVSM VGNVSDKVSK VDAFVKGLEE EMRKIDAFKR 60 ELPLCMLLLN DAIVALKEES MQCVTRNVAP ILEEFIPLKN DKKENKHSEE DDASITAKKD 120 KDPNNNNYNI NKDKKNWMSS VQLWNTDDDD YRSTDHKLDT KRNDEDPFQG CKNRGAARAF 180 MPFKANLGFA VRKEEKEEIP VHGLTLLTPG MKNLKEESGS TGSRTSCSRA VSSSAPNAHS 240 NFRSGPQPLA HHHQQQQQQQ QTARKQRRCW SPELHRRFVN ALQQLGGSQV ATPKQIRELM 300 QVDGLTNDEV KSHLQKYRLH TRRLPPSTTT PANQSVVVLG SGLWMSQDQY GESSKGSSSQ 360 SGSPQGPLQL ATNTGGTSTT GGDSMEDDED AKSEGYSWKS HIHKPGKDDV

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MGSVPPELSL DLRPTFVPKT ISNFLKEVSM VGNVSDKVSK VDAFVKGLEE EMRKIDAFKR  60
ELPLCMLLLN DAIVALKEES MQCVTRNVAP ILEEFIPLKN DKKENKHSEE DDASITAKKD  120
KDPNNNNYNI NKDKKNWMSS VQLWNTDDDD YRSTDHKLDT KRNDEDPFQG CKNRGAARAF  180
MPFKANLGFA VRKEEKEEIP VHGLTLLTPG MKNLKEESGS TGSRTSCSRA VSSSAPNAHS  240
NFRSGPQPLA HHHQQQQQQQ QTARKQRRCW SPELHRRFVN ALQQLGGSQV ATPKQIRELM  300
QVDGLTNDEV KSHLQKYRLH TRRLPPSTTT PANQSVVVLG SGLWMSQDQY GESSKGSSSQ  360
SGSPQGPLQL ATNTGGTSTT GGDSMEDDED AKSEGYSWKS HIHKPGKDDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	2e-53	G2-like family protein