PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021285549.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Nin-like

Protein Properties

Length: 952aa MW: 104395 Da PI: 6.2406

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021285549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.4	7.1e-29	632	682	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ XP_021285549.1 632 EKTISLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 682 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MDGGGGFTPN STFGNLSDAA MDLDFMDELL FEGCWLETSD GFNFAQPGPS SSSGPNDPSQ 60 CLPVSGSSTV PFTINSHPMH QEETERNVPP PPYPKIEDLS KSQSQNWAAV GTATSLSQPG 120 SFIVEGTELG SRWWIGPTAE SGSSSSVKER LMEAIGYLKE CTKDRDVLIQ IWVPVKREGK 180 HVLTTEGQPY FLNTNCKSLE IFRDVSKSYN FPAEEDSKES VGLPGRVYLG KLPEWTPDVR 240 FFRSDEYPRI KFAHKYNVGG SLALPVFERG SGTCLGVVEI VTTTQKINYR PELEHVCKAL 300 EAVDLRSSHN FSPPSVEGYN ELYQAALPEI VEVLKSVCKT YKLPLALTWA ACVNQRKSGC 360 RHSDENFYHC VSTVDAACLA DEGFLDFLEA CSEHHLFRGQ GIVGRAFTIN KQCFATDITA 420 FSKTNYPLSH HARMFGLRGA VAIPLQSIFS ESVEFVLELF LPKDCHDSEA QKQMLNSLSS 480 FIQQACQSLH VVVDKELEEE VILPVKEMIV ASDGKSDKEE TQFRISCLKE NSPEESSWIA 540 HMMEAQQKGK GVSVSWEYQK EEPKEEFRVT TQWEDTQLEL YNKQVLSDFG QLHQNAGTKT 600 SVEGGGGDSS SSGGRRLLAG KKAGGKRRTK MEKTISLQVL RQYFAGSLKD AAKSIGVCPT 660 TLKRICRQHG ITRWPSRKIK KVGHSLKKLQ LVIDSVQGAE GAIQIGSFYS SFPELSSPNF 720 SGNGPSSSLK ISNHSKPSET QLESGMFSQG AAAPKSPSSS CSQSSGSSTC CSTGAKQHST 780 TINALGSADG FTVEDPGGAL KRALSDAELH ALNQEEPKLL ARSQSHKTFG EHPSFETLPP 840 LPRSGGQNIR AGGAIRVKAA FGEVKIRFSL QPSCGFRDLQ QEIAMRFNIE DFSKIDLKYL 900 DDDHEWVLLT CDADLEECID IYKSSQSHTI KISLHPASHP SLGSSFGSTA PL

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MDGGGGFTPN STFGNLSDAA MDLDFMDELL FEGCWLETSD GFNFAQPGPS SSSGPNDPSQ  60
CLPVSGSSTV PFTINSHPMH QEETERNVPP PPYPKIEDLS KSQSQNWAAV GTATSLSQPG  120
SFIVEGTELG SRWWIGPTAE SGSSSSVKER LMEAIGYLKE CTKDRDVLIQ IWVPVKREGK  180
HVLTTEGQPY FLNTNCKSLE IFRDVSKSYN FPAEEDSKES VGLPGRVYLG KLPEWTPDVR  240
FFRSDEYPRI KFAHKYNVGG SLALPVFERG SGTCLGVVEI VTTTQKINYR PELEHVCKAL  300
EAVDLRSSHN FSPPSVEGYN ELYQAALPEI VEVLKSVCKT YKLPLALTWA ACVNQRKSGC  360
RHSDENFYHC VSTVDAACLA DEGFLDFLEA CSEHHLFRGQ GIVGRAFTIN KQCFATDITA  420
FSKTNYPLSH HARMFGLRGA VAIPLQSIFS ESVEFVLELF LPKDCHDSEA QKQMLNSLSS  480
FIQQACQSLH VVVDKELEEE VILPVKEMIV ASDGKSDKEE TQFRISCLKE NSPEESSWIA  540
HMMEAQQKGK GVSVSWEYQK EEPKEEFRVT TQWEDTQLEL YNKQVLSDFG QLHQNAGTKT  600
SVEGGGGDSS SSGGRRLLAG KKAGGKRRTK MEKTISLQVL RQYFAGSLKD AAKSIGVCPT  660
TLKRICRQHG ITRWPSRKIK KVGHSLKKLQ LVIDSVQGAE GAIQIGSFYS SFPELSSPNF  720
SGNGPSSSLK ISNHSKPSET QLESGMFSQG AAAPKSPSSS CSQSSGSSTC CSTGAKQHST  780
TINALGSADG FTVEDPGGAL KRALSDAELH ALNQEEPKLL ARSQSHKTFG EHPSFETLPP  840
LPRSGGQNIR AGGAIRVKAA FGEVKIRFSL QPSCGFRDLQ QEIAMRFNIE DFSKIDLKYL  900
DDDHEWVLLT CDADLEECID IYKSSQSHTI KISLHPASHP SLGSSFGSTA PL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein