PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021285057.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 324aa    MW: 35870.1 Da    PI: 7.9603
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021285057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.2e-05216238123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C++C+k+F++ ++L  H r++
  XP_021285057.1 216 YRCGNCKKVFRSYDTLDEHKRVC 238
                     9********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEKHKCKLCA RTFSNGRALG GHMKGHLATH PLPPKTTQHQ LGDRVESASS SSASSGEEQE  60
LQEEKSREVV EEKSLVYGLR ENPRKSFRFA DPEFSFAVDS GSVVQDRESE TESRNPTRRR  120
SKRNRKVGTN ITTDEIKEPK LLRKPSLVES PTEPEPVSSV SDTSPEEDVA MCLMMLSRDV  180
WKTKNAEQNS VELLEESKEI ELNNKSELSK KIRGKYRCGN CKKVFRSYDT LDEHKRVCCE  240
TKNAGKVAAA AVVAANDKTF QCPFCYRVFG SGQALGGHKR SHLLAAASSS NAAAANSTKF  300
DNKLIDLNLP APSEDDEFSV VSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.19e-29C2H2 family protein