PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284786.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 307aa    MW: 34287.2 Da    PI: 9.9912
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.84.7e-28240296359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++p sYY+C+s  gCp++k+ver+ edp+++++tYeg+H+h+
  XP_021284786.1 240 DDYSWRKYGQKPIKGSPYP-SYYKCSSMrGCPARKHVERCLEDPTMLVVTYEGDHKHS 296
                     99*****************.9****9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MTEASGVCVS MTPRSDFKVH EVAQSSFRRA NHLFSCISDQ SQKRSIQEVS LMAQDAVNGF  60
RKLLTLLDGS MQSDCKRIRK GPLPKSHKVN PIEFMDSPDF ASQSSDYKSS QPHILRQSVS  120
PQSNQSNTGL IPRNVVVLSN LIMGLHHSSI LPSISMFRLD ARSNMDKKTI PQSSSEILVS  180
QDESCFFPSK RKVGTEGEEA STKCAASTGG CHCSKRRKLR IKKTVRVPAV SNKLSDIPPD  240
DYSWRKYGQK PIKGSPYPSY YKCSSMRGCP ARKHVERCLE DPTMLVVTYE GDHKHSRITF  300
QAPNVMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.18e-54WRKY family protein