PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021284606.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 426aa MW: 47811.4 Da PI: 5.1426 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 83.9 | 1.3e-26 | 151 | 216 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l+ ++++g+++ln a+ L +v ++RRiYDi+NVLe+++liek++kn+irwkg XP_021284606.1 151 RYDSSLGLLTKKFVNLIMEAKDGTLDLNRTAEVL---EV--QKRRIYDITNVLEGIGLIEKTSKNHIRWKG 216 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 426 aa Download sequence |
MGNSSEDPSR SYHPSQFQFQ LLHSHSQSLS IESNQNQNQP LSYGKRMFLA SLGRPPLLFS 60 SFDQTNARLD HVPSAFPTPP TKERESDEAQ TSGRSDVPGH GKVVNRPLLE PERTKGGKQN 120 SKAKAKKNAK SGTQKQNADS PNGLNAAGNC RYDSSLGLLT KKFVNLIMEA KDGTLDLNRT 180 AEVLEVQKRR IYDITNVLEG IGLIEKTSKN HIRWKGSDDM GSKVLDDQVT RLKAEMQSLY 240 AEEQKLDEYI REKQESLRSL DEDANYQKYL FLTEEDIMSL PCFQNQTVFA IKAPENTYIE 300 VPDPDEEIGF PQKPIQRQYK MIIRSHMGPI DLYLLSKYEG QVEDTTVKQA KSVDASSSYG 360 LLCGVECPEL SSEEKASHNN SSKTVNLVCP EAYGIQKLIP TVSEQADDDY WFLSDPGVSI 420 TDLWDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G47870.2 | 1e-102 | E2F/DP family protein |