PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284500.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bZIP
Protein Properties Length: 393aa    MW: 41455.5 Da    PI: 10.425
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.84e-07362382525
                     CHHHCHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKk 25 
                     +r+rr++kNRe+A rsR+RK+
  XP_021284500.1 362 RRQRRMIKNRESAARSRARKQ 382
                     79******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MGTNMNFKNF GSNPPPSADG GGIKPQPPGN MQLIRQPSIY SLTFDEFQST VGGIGKDFGS  60
MNMDELLKNI WSAEETQTMA FSSGGLDGNG GLQRQGSLTL PRTLSQKTVD EVWKDIAKEY  120
SIGKDGIGTG AINNIPQRQQ TLGEMTLEEF LVRAGVVRED TPLVAKVNNG GFFGELPRSG  180
TNTGFGIGFQ QGGRGANLMG NRISESGNQI GIQASNLPSN VNGVRSNQHQ LAQRQTQQQQ  240
QHQQQQQPIF PKQPAVGYGA QIPLQSGGQL GSPGIRGGIA GIGDQGLSNG LIQGGVLQGG  300
GMGMVGLGGP VSVATGSPAN QLSSDGIGKS SGDTSSVSPV PYVFNGSLRG RKCSAVEKVA  360
ERRQRRMIKN RESAARSRAR KQIMLQYGNL IAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.21e-100bZIP family protein