PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021284009.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 359aa    MW: 39447.6 Da    PI: 10.0583
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021284009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.52.1e-31287344359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYeg+Hnh+
  XP_021284009.1 287 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPRMLIVTYEGDHNHS 344
                     99************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MAVELMMGYG RGDSFAGKME ENALREAATA GIQGVEELIR LMSNSQQLYN QDASFKTSSP  60
SGPEPAMEIQ AVTDKTVNSF KKVISLLGRP RTGHARFRRA PFTSLQQEEK QQQQDLQQPR  120
QKIQESGTCS VQINKDQVSA FKPFCPTPGH RLPPLPHNHH QSKTNPLLVA KSGLLERNEA  180
PTTINFTSSP PLSAGNSFMS SLTGDTDTMQ PSFSSGFQFT SPSHVPSSGK PPLSSSLKRK  240
CNSMDDAALK CGSSSGRCHC SKKRKSRVKR VIRVPAISNK MADIPPDDYS WRKYGQKPIK  300
GSPHPRGYYK CSSVRGCPAR KHVERALDDP RMLIVTYEGD HNHSHNITDA PAAVVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-94WRKY family protein