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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_021283976.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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| Family | BES1 | ||||||||
| Protein Properties | Length: 311aa MW: 34003.7 Da PI: 8.8097 | ||||||||
| Description | BES1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF822 | 209.9 | 6.8e-65 | 12 | 147 | 3 | 142 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqss 97
+rkp+w+ErEnn+rRERrRRaiaakiy+GLRaqGny+lp ++DnneVlkALc+eAGwvve+DGttyrkg+kp+ ++ gssa+++p ss++ s
XP_021283976.1 12 PRRKPSWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPXHCDNNEVLKALCTEAGWVVEEDGTTYRKGCKPP-PIDIPGSSAKITPFSSQNPS 105
58************************************************************************.******************** PP
DUF822 98 lkssalaspvesysaspksssfpspssldsislasaasllpvlsv 142
+ ssa++sp++s + sp+sssfpsp++ld ++ +sllp+l+
XP_021283976.1 106 PLSSAFPSPIPSCQVSPSSSSFPSPTRLDANNP---SSLLPFLRS 147
*****************************9966...467777665 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 311 aa Download sequence |
MTSDGATSTP APRRKPSWRE RENNRRRERR RRAIAAKIYT GLRAQGNYNL PXHCDNNEVL 60 KALCTEAGWV VEEDGTTYRK GCKPPPIDIP GSSAKITPFS SQNPSPLSSA FPSPIPSCQV 120 SPSSSSFPSP TRLDANNPSS LLPFLRSAIP SSLPPLRISN SAPVTPPLSS PTSRNPKPIP 180 NWEAIAKESM ASFNYPFYAV SAPASPTHRH FHAPXTIPEC DESDTSTVES GQWISFQKFA 240 PSTSQMPTSP TFNLVKPVVP QSLPNDLIME KGRGSEFQFE SGQVKPWEGE RIHEVGLDDL 300 ELTLGSGKAR C |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 13 | 32 | RRKPSWRERENNRRRERRRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G75080.2 | 1e-139 | BES1 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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