PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021283650.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 560aa MW: 61135.5 Da PI: 6.5256

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021283650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.1	6.6e-12	397	455	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe kv++L++e ++L +l +l+ +a l+s++ XP_021283650.1 397 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTMLQRDSAGLTSQN 455 9****************************************************999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MEGISESRSN MQKLQSPPSN SIPKPQSNID IPIFNASQMA SSSPHTRLSP ENNNNKRPGI 60 PPSHPNYPAA TSPYSQIIGS RSNSQQGAPS HSRSLSQPTF FSLDSLPPWS PPPFREPSVA 120 SLSDPACNDV SMEERVVNSN VRSSLPSPVA RGVNEFRVGE SSSLPPRKGH RRSSSDVPLG 180 FSAMIQSSPQ LLPIGSRGVL DRSVSGRESS SGVEKPIQLV KRESEWSKDG SSNVEGTSER 240 KSEGDVADDL FNAYMNLDSL ETLNSSGTED KDLDSRASGT KTYGGESSDN EVESRVNGHP 300 ISMQGMSAGA SNEKRVKRSA GGDIAPTARH HRSVSMDSYM GSLQFDDESS KIPPGSSADA 360 NSGKFNLELG SSEFSEAEMK KIMENEKLAE IASVDPKRAK RILANRQSAA RSKERKMRYI 420 AELEHKVQTL QTEATTLSAQ LTMLQRDSAG LTSQNNELKF RLQAMEQQAQ LKDALNEALA 480 AEVQRLKVTA AELSGEAHLS SCMAQQLSLN HPMFQLQPQQ PQQVNVYQMQ QQQQQPQHSQ 540 HNQLQTLQQQ NDDPTANESK

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MEGISESRSN MQKLQSPPSN SIPKPQSNID IPIFNASQMA SSSPHTRLSP ENNNNKRPGI  60
PPSHPNYPAA TSPYSQIIGS RSNSQQGAPS HSRSLSQPTF FSLDSLPPWS PPPFREPSVA  120
SLSDPACNDV SMEERVVNSN VRSSLPSPVA RGVNEFRVGE SSSLPPRKGH RRSSSDVPLG  180
FSAMIQSSPQ LLPIGSRGVL DRSVSGRESS SGVEKPIQLV KRESEWSKDG SSNVEGTSER  240
KSEGDVADDL FNAYMNLDSL ETLNSSGTED KDLDSRASGT KTYGGESSDN EVESRVNGHP  300
ISMQGMSAGA SNEKRVKRSA GGDIAPTARH HRSVSMDSYM GSLQFDDESS KIPPGSSADA  360
NSGKFNLELG SSEFSEAEMK KIMENEKLAE IASVDPKRAK RILANRQSAA RSKERKMRYI  420
AELEHKVQTL QTEATTLSAQ LTMLQRDSAG LTSQNNELKF RLQAMEQQAQ LKDALNEALA  480
AEVQRLKVTA AELSGEAHLS SCMAQQLSLN HPMFQLQPQQ PQQVNVYQMQ QQQQQPQHSQ  540
HNQLQTLQQQ NDDPTANESK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-121	bZIP family protein