PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 26097.8 Da PI: 9.5983 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.1 | 2.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k ien +nrqvt+skRrng++KKA+EL vLCda+v++i+fs tgkl+e++s XP_021283648.1 9 KLIENATNRQVTYSKRRNGLFKKANELTVLCDARVSIIMFSRTGKLHEFIS 59 569**********************************************86 PP | |||||||
2 | K-box | 98.3 | 1.1e-32 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk g++l+++++e++q++l+kLk+ ++nL++e+R+++G++L++ s+++Lq Leq++e+s+k iR++K++++ +qi++++kk ++++e++++L XP_021283648.1 71 YQKVLGVDLWTTQYEKMQEQLKKLKEVNRNLRKEIRQRMGDCLNDVSFEDLQALEQEMETSVKLIRDRKYRVISNQIDTSRKKVRNVEEIHRNLL 165 78888999**************************************************************************************9 PP K-box 96 kkle 99 ++l+ XP_021283648.1 166 HELD 169 9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MARGKIQIKL IENATNRQVT YSKRRNGLFK KANELTVLCD ARVSIIMFSR TGKLHEFISP 60 STSTKQIYDQ YQKVLGVDLW TTQYEKMQEQ LKKLKEVNRN LRKEIRQRMG DCLNDVSFED 120 LQALEQEMET SVKLIRDRKY RVISNQIDTS RKKVRNVEEI HRNLLHELDA IKEDPYGLVD 180 NGGDYDTIIG YQNGGPRIFA LRLQPNHPNL HSGGGSDLTT YPLLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 9e-96 | MIKC_MADS family protein |