PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021283494.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SBP
Protein Properties Length: 385aa    MW: 40692.8 Da    PI: 9.4332
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021283494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP138.81.5e-4386161176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+
  XP_021283494.1  86 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 161
                     6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MEMGSGSLTE SGGSSTNSST ESLNGLKFGK KIYFEDAAAG AAAASATGAG STVGTPTKAG  60
PGSSSSSGSG RKARGGGVVQ GTQPPRCQVE GCKVDLSDAK AYYSRHKVCG MHSKSPKVIV  120
AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK PPPGSLLTSR YGRLSSSIIE  180
SSRGGSFIMD FTAYPRLSGR DAWPTARSSE RLPGNQNTAT GRSLPHPWQN NSENPPPDLF  240
LQGSPGGTGF SSAGIPPGEC FTGVADSSCA LSLLSNQPWG SRNRASSLGV NDMMNTEGSS  300
VAQPTTPHGA TVNPYSNASW GFKGNDSGST SHELPPHLGL GQISEPVNNQ FSGGLDLSQQ  360
SRRQYMELEQ SRAYDTSTQH SHWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.19e-71SBP family protein