PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SBP | ||||||||
Protein Properties | Length: 385aa MW: 40692.8 Da PI: 9.4332 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 138.8 | 1.5e-43 | 86 | 161 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dls+ak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_021283494.1 86 RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 161 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence |
MEMGSGSLTE SGGSSTNSST ESLNGLKFGK KIYFEDAAAG AAAASATGAG STVGTPTKAG 60 PGSSSSSGSG RKARGGGVVQ GTQPPRCQVE GCKVDLSDAK AYYSRHKVCG MHSKSPKVIV 120 AGLEQRFCQQ CSRFHQLPEF DQGKRSCRRR LAGHNERRRK PPPGSLLTSR YGRLSSSIIE 180 SSRGGSFIMD FTAYPRLSGR DAWPTARSSE RLPGNQNTAT GRSLPHPWQN NSENPPPDLF 240 LQGSPGGTGF SSAGIPPGEC FTGVADSSCA LSLLSNQPWG SRNRASSLGV NDMMNTEGSS 300 VAQPTTPHGA TVNPYSNASW GFKGNDSGST SHELPPHLGL GQISEPVNNQ FSGGLDLSQQ 360 SRRQYMELEQ SRAYDTSTQH SHWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 9e-71 | SBP family protein |