PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021283045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C3H | ||||||||
Protein Properties | Length: 139aa MW: 15324 Da PI: 7.4579 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 30.3 | 7.1e-10 | 65 | 87 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++f++tG+C++Gd+Ck+ H++ XP_021283045.1 65 VCNRFLKTGFCQFGDNCKYFHPM 87 5*******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
TEEDKENALG KYYCDYCEKQ FQDTPSARKR HLQGLQHLRA KAQWYHSQNA NDPNHSLTEP 60 FAKGVCNRFL KTGFCQFGDN CKYFHPMNDS RGANPQAAAA PGPGGVEGAG IGMSWGNLPP 120 SLKPPPEGGY PPLPFVDWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 9e-32 | C3H family protein |