PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021282573.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 25218.1 Da PI: 4.5401 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.4 | 9.7e-20 | 92 | 141 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f+tae Aa a+++a+++++g XP_021282573.1 92 YRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALAMRG 141 9*******.**********44465..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MDSSYFQYPY SQFSPESSSS YVSQENLSLD SFNYPPSQAL PFNENDSQEM LLLGVLNQAP 60 ASSFDTASVN NSRDDEVSSK ANEEESTGKI SYRGVRRRPW GKYAAEIRDS TRNGVRVWLG 120 TFDTAEAAAL AYDQAALAMR GSLAILNFPM EKVYESLQEM NYGFEEGCSP VLTMKKRHSL 180 KGKKGMMKKV KKEKEVSTEN VVVLEDLGTD YLEELLSISE SSTLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 6e-50 | ERF family protein |