PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021282345.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

MYB_related

Protein Properties

Length: 1182aa MW: 131761 Da PI: 9.565

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021282345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	5.1e-08	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W + E e++++a +++G++ Wk++a+ + +R+ +++ XP_021282345.1 45 QWNKVEIERFYKAYREYGKD-WKKVAAAVR-NRSTEMV 80 6***************99.*****.99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1182 aa Download sequence
MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKKLAD KLGSQWNKVE IERFYKAYRE 60 YGKDWKKVAA AVRNRSTEMV EALYLMNRAY LSLPDGTASV IGLIAMMTDH YSVLGGSDCE 120 RESNEPSEIP QKAQKRKRAK VHLGSSKEDV VQPLSIASSQ GCLSLLKKAG LNGIHPHAVR 180 KRTPRVPVSY SYRRDDTESD IPPNKRVKKS ETDDNDDEHV AALTLTGALQ RGGSPQVSQT 240 PYKRAECKRS SPVESYDRMS PQPETTKAKL DDSSYECWME GRPRGMEPVI GTHARDADPL 300 MDMEVVVTIE GHRKGKKFYR KKMKVEETKN NLSDDGGEAC SGTDERIRGS TLKGKVDMEI 360 SSAKSEQLSP WSQRKRSNKK LVFGDESSSI DALLTLANLS TSMLPTSIME SGLESSVKLK 420 ENRITLESVD KSSAPEAAST GHHRDKIKHL GPKEKVLNSI TGVEDATSRK LKVGRNSAME 480 DNVVSEAKLQ PEPTNNSWKR KRKSFSSKLQ ISNAEAPMDS HLRQSFDKED MAEEQNKYLT 540 KGKCGGQSSV QSRQWKSFRV SEDSPTNDDP KMAGIDSVVL TSQVPVPNPV SLATKHQSRR 600 KMNLKRALLS TDRSSSKCTL KNQPNKQSVT QDRLKEQLSS CLSSNLARRW YSFEWFYSAI 660 DYAWFAKREF VEYLNHVGLG HVPRLTRVEW GVIRSSLGKP RRFSERFLHE EREKLKQYRE 720 SVRQHYSQLR VGTREGLPTD LAYPLSVGQR VIAIHPKTRE VHDGKVLTVD HDRCRVQFDS 780 PELGVEFVTD VDCMPLNPLE NMPEALRRQN LAFDKFSMTP KQSQVNSHSD FGGSMVFTST 840 GRLENGTSPV NISANQIKVD ANCNILHAKA AVPHVVSAHQ AAYGQPLTMA HIQGRETAIR 900 AMSELNGALD KKEALLMELR NMNNDISENR NGESCLKDSE PFKKHIATVL VELKEASGQA 960 SSALLNLRQR NAYPTNLLSS WQKPPTNSNF FGGLTSSVDS SHVSPESGSG VGDIVQGSRL 1020 KAHAMVDAAI KAMSSMKEGE DAFMRIGEAL DSLDKRQFTS DIRMPLMKSR EQENGSMGYR 1080 SHLVSSTSKP VAAVWATNPK SQEACDKNEE QVPSELIASC VATLLMIETC TERQYPPADV 1140 AQIIDSAVTS LHPCFPQNLP IYREIQMCMG RIKTQILALI PT

Sequence ? help Back to Top

Protein Sequence Length: 1182 aa Download sequence

MAPTRKSKSV NKRYSSVYEV SPDKDAGNSS KSKPKKKLAD KLGSQWNKVE IERFYKAYRE  60
YGKDWKKVAA AVRNRSTEMV EALYLMNRAY LSLPDGTASV IGLIAMMTDH YSVLGGSDCE  120
RESNEPSEIP QKAQKRKRAK VHLGSSKEDV VQPLSIASSQ GCLSLLKKAG LNGIHPHAVR  180
KRTPRVPVSY SYRRDDTESD IPPNKRVKKS ETDDNDDEHV AALTLTGALQ RGGSPQVSQT  240
PYKRAECKRS SPVESYDRMS PQPETTKAKL DDSSYECWME GRPRGMEPVI GTHARDADPL  300
MDMEVVVTIE GHRKGKKFYR KKMKVEETKN NLSDDGGEAC SGTDERIRGS TLKGKVDMEI  360
SSAKSEQLSP WSQRKRSNKK LVFGDESSSI DALLTLANLS TSMLPTSIME SGLESSVKLK  420
ENRITLESVD KSSAPEAAST GHHRDKIKHL GPKEKVLNSI TGVEDATSRK LKVGRNSAME  480
DNVVSEAKLQ PEPTNNSWKR KRKSFSSKLQ ISNAEAPMDS HLRQSFDKED MAEEQNKYLT  540
KGKCGGQSSV QSRQWKSFRV SEDSPTNDDP KMAGIDSVVL TSQVPVPNPV SLATKHQSRR  600
KMNLKRALLS TDRSSSKCTL KNQPNKQSVT QDRLKEQLSS CLSSNLARRW YSFEWFYSAI  660
DYAWFAKREF VEYLNHVGLG HVPRLTRVEW GVIRSSLGKP RRFSERFLHE EREKLKQYRE  720
SVRQHYSQLR VGTREGLPTD LAYPLSVGQR VIAIHPKTRE VHDGKVLTVD HDRCRVQFDS  780
PELGVEFVTD VDCMPLNPLE NMPEALRRQN LAFDKFSMTP KQSQVNSHSD FGGSMVFTST  840
GRLENGTSPV NISANQIKVD ANCNILHAKA AVPHVVSAHQ AAYGQPLTMA HIQGRETAIR  900
AMSELNGALD KKEALLMELR NMNNDISENR NGESCLKDSE PFKKHIATVL VELKEASGQA  960
SSALLNLRQR NAYPTNLLSS WQKPPTNSNF FGGLTSSVDS SHVSPESGSG VGDIVQGSRL  1020
KAHAMVDAAI KAMSSMKEGE DAFMRIGEAL DSLDKRQFTS DIRMPLMKSR EQENGSMGYR  1080
SHLVSSTSKP VAAVWATNPK SQEACDKNEE QVPSELIASC VATLLMIETC TERQYPPADV  1140
AQIIDSAVTS LHPCFPQNLP IYREIQMCMG RIKTQILALI PT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-159	MYB_related family protein