PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021282074.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 352aa    MW: 39935.7 Da    PI: 10.3507
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021282074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.69.6e-32285342359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ edp+++++tYegeHnh+
  XP_021282074.1 285 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCLEDPSMLIVTYEGEHNHS 342
                     9*************************988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEEVEQANKA AIESCHRVLS LLSSPKDQVQ YSNLMMETGE AVFKFKKVVS LLSNDLSHAR  60
VRKLKKFRST LPQKIFLESA NCRTILSPKP LQVYRSNLFD KPSFDLDARA KNQLQLTPKV  120
FFENPSFEMS SSVKPSLRTA QIKPSQDYHF VHHQQQMQRL QFQQQQVKFQ ADMAFSKSNS  180
GMNIKFDGSS CTPTMSSARS FVSSLSMDGS VANLDGNSFH LIGMPHHFDQ ISQQSRRRCS  240
GRAEDGSMKC GTTGKCHCSK RRKLRIKRSI KVPAISNKVA DIPPDEYSWR KYGQKPIKGS  300
PHPRGYYKCS SVRGCPARKH VERCLEDPSM LIVTYEGEHN HSRLLSTQSA HT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28650.11e-113WRKY family protein