PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021281545.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family C2H2
Protein Properties Length: 303aa    MW: 34996.8 Da    PI: 5.5552
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021281545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034161185123
                     EEETTTTEEESSHHHHHHHHHH..T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                     + C+ C+k ++  +++++H+++  H
  XP_021281545.1 161 FYCELCNKQYKLAMEFEVHLSSydH 185
                     79*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDYQQYNSAQ ETNIRDKQQQ QEDLAYQDSL IEDLAEDFCL PINHKPTENV DLENVEQATL  60
DTRLNSSNIG FRLLQKMGWK GKGLGKDEQG ITEPIRSGIR DPKLGIGKQE EDDFFTAEEN  120
IQRRKLDIEV EETEEHAKKR EVLAEREQKI QTEVKEIRKV FYCELCNKQY KLAMEFEVHL  180
SSYDHNHRKR FKEMREMHGS SSRDDRQKRE QQRQEKEMAK FAQMAGARKQ QQQQQQQELR  240
QESGPAAASA PVTATALADQ DQRQALKFGF SSKTSTSKNA FGNAAKKPKF PVASVFGNDS  300
DDE