PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281295.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

BES1

Protein Properties

Length: 701aa MW: 78686.9 Da PI: 5.2643

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	147.9	8.6e-46	76	216	1	134
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..as 89 gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +gs+p +++ + ss+s +s XP_021281295.1 76 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSRPAaGTSAGITSSSSqmVS 170 6899***************************************************************98788889986444444444442344 PP DUF822 90 pesslq.sslkssalaspvesysaspksssfpspssldsislasaa 134 + ++ + ++ +ss ++ v+ ++++k + +p ps +d s+a+++ XP_021281295.1 171 QPTPPTsLRGVSSGYRTSVDYNACRMKGVFMPTPSPYDLSSSAHSQ 216 55555557889*************************98877553 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MATDMQKLIG ASEEDDEEEM EMDVKEEDDE DEENGEKHIA AQMMMGVDGV MQSTSSSGQF 60 QHHQQLQEQV STPGGGGARR SRPLEEKERT KLRERHRRAI TARILAGLRR HGNYNLRVRA 120 DINDVIAALA REAGWVVLPD GTTFPSRSQG SRPAAGTSAG ITSSSSQMVS QPTPPTSLRG 180 VSSGYRTSVD YNACRMKGVF MPTPSPYDLS SSAHSQSSGM VGDGGEQTES LPLIAGSMEA 240 VNNKQVIDLP PKLPEHDFAG TPYVPVYVML PLGIINMKCE LIDPDCLLKQ LRVLKSINVD 300 GVMVDCWWGI VEAHAPQEYN WSGYRRLLQM VRELKLKLQV VMSFHECGGN VGDDVCIPLP 360 HWVAEIGRSN PDIFFTDREG RRNPECLSWG IDKERILRGR TAVEVYFDYM RSFRVEFDEF 420 FEDGIISMVE VGLGPCGELR YPSCPVKHGW RYPGIGEFQC YDQYMSKSLR KAAELREHSF 480 WARGPDNAGS YNSQPDETGF FCDGGDYDGY YGRFFLNWYS QVLVDHGDRV LSLAKLAFEG 540 TCIAAKLPGI HWWYKTASHA AELTAGFYNP CNRDGYTAIA AMLHKHGATL NFACPELHLL 600 EQHEDLREAL ADPQGLVWQV LNAAWDVCIP LASENALLCH DRIGYNKILD NVKPVNDPDG 660 RHFSSFTYLR LSPLLMERQN FMEFERFVKR MHGEAVLDLQ V

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MATDMQKLIG ASEEDDEEEM EMDVKEEDDE DEENGEKHIA AQMMMGVDGV MQSTSSSGQF  60
QHHQQLQEQV STPGGGGARR SRPLEEKERT KLRERHRRAI TARILAGLRR HGNYNLRVRA  120
DINDVIAALA REAGWVVLPD GTTFPSRSQG SRPAAGTSAG ITSSSSQMVS QPTPPTSLRG  180
VSSGYRTSVD YNACRMKGVF MPTPSPYDLS SSAHSQSSGM VGDGGEQTES LPLIAGSMEA  240
VNNKQVIDLP PKLPEHDFAG TPYVPVYVML PLGIINMKCE LIDPDCLLKQ LRVLKSINVD  300
GVMVDCWWGI VEAHAPQEYN WSGYRRLLQM VRELKLKLQV VMSFHECGGN VGDDVCIPLP  360
HWVAEIGRSN PDIFFTDREG RRNPECLSWG IDKERILRGR TAVEVYFDYM RSFRVEFDEF  420
FEDGIISMVE VGLGPCGELR YPSCPVKHGW RYPGIGEFQC YDQYMSKSLR KAAELREHSF  480
WARGPDNAGS YNSQPDETGF FCDGGDYDGY YGRFFLNWYS QVLVDHGDRV LSLAKLAFEG  540
TCIAAKLPGI HWWYKTASHA AELTAGFYNP CNRDGYTAIA AMLHKHGATL NFACPELHLL  600
EQHEDLREAL ADPQGLVWQV LNAAWDVCIP LASENALLCH DRIGYNKILD NVKPVNDPDG  660
RHFSSFTYLR LSPLLMERQN FMEFERFVKR MHGEAVLDLQ V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein