PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281142.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

SBP

Protein Properties

Length: 323aa MW: 35833.9 Da PI: 9.2355

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281142.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.9	4.5e-41	167	244	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ XP_021281142.1 167 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKSQQ 244 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGNPSAIILS GEEPNQESDP NRQXFDHYAT TTTTQQSFNE TLLSHQHSTA FSHQHHFHNP 60 NQAQAQPQPH APLHSLYDPR AYSGTSAYST PHPSLLSLDP VSGAGGSGGG YFLVPKTEEV 120 SRPVDFTARI GLNLGGRTYF SSAEDDFVNR LYRRSRPGDP SSTNSPRCQA EGCNADLTHA 180 KHYHRRHKVC EFHSKASTVI AAGLTQRFCQ QCSRFHLLSE FDNGKRSCRK RLADHNRRRR 240 KSQQQQQQQP NNQENQKPLL HENGRNSSAE NPPRSPPDSG IQSSSSVTVA VSPPRMSLDC 300 FRQRPYNATA SSSSSSTLFF SSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-76	SBP family protein