PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021281141.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

WRKY

Protein Properties

Length: 510aa MW: 55008.6 Da PI: 8.7686

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021281141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.1	5.7e-31	268	326	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r++ed++++++tYeg+Hnh+ XP_021281141.1 268 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCSEDKSILITTYEGNHNHP 326 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MEKKHRRELT FLRSGDFLRP NSGLHDRTLD DSSDHVKPTI KEMDFFSTNN QPHDPLQESK 60 INNGSSSLFD SGVNTGLNLL SSSPRVSRTT NEEKPNSEMS ALRIELQRLH EENRRLRSML 120 DQITKNYNEL QGQLFMAVQK QAHGNQGEQG AVNGMSSLPV SVQQVMDPRP SAALDVNAPS 180 ASDDKTQELS VSPVNTMEVV SKERDHQMTR ISGKHVSVED GTDRTSQSWG SPKSPKVEQS 240 KNEEQVSEVP FRKARVSVRA RSEAPLISDG CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP 300 VRKQVQRCSE DKSILITTYE GNHNHPLPPA ATAMANTTSA AAAMLLSGST TSKDGLSSSG 360 YFPSLPYGST MATLSASAPF PTITLDLTQG PNAVPFLRPP PSTATFPLPL QGYPQLLGHS 420 MFSPTKLSAL PVTQLGQRPA SMVDTVTAAI ASDPNFTAAL AAAISTIMGA PPSNSGNTIN 480 NGGNSNASNR VPGLPGSPQL PQSCTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MEKKHRRELT FLRSGDFLRP NSGLHDRTLD DSSDHVKPTI KEMDFFSTNN QPHDPLQESK  60
INNGSSSLFD SGVNTGLNLL SSSPRVSRTT NEEKPNSEMS ALRIELQRLH EENRRLRSML  120
DQITKNYNEL QGQLFMAVQK QAHGNQGEQG AVNGMSSLPV SVQQVMDPRP SAALDVNAPS  180
ASDDKTQELS VSPVNTMEVV SKERDHQMTR ISGKHVSVED GTDRTSQSWG SPKSPKVEQS  240
KNEEQVSEVP FRKARVSVRA RSEAPLISDG CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP  300
VRKQVQRCSE DKSILITTYE GNHNHPLPPA ATAMANTTSA AAAMLLSGST TSKDGLSSSG  360
YFPSLPYGST MATLSASAPF PTITLDLTQG PNAVPFLRPP PSTATFPLPL QGYPQLLGHS  420
MFSPTKLSAL PVTQLGQRPA SMVDTVTAAI ASDPNFTAAL AAAISTIMGA PPSNSGNTIN  480
NGGNSNASNR VPGLPGSPQL PQSCTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	1e-104	WRKY family protein