PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280932.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 725aa    MW: 79194.9 Da    PI: 6.3488
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3373.3e-1033677242374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL+++Ae +++g+  laq +Larl+++ sp g+p+ R+a+yf+eAL+  l         + ++s+ s++n++ ++ a+k fse+sPi++f+++
  XP_021280932.1 367 IDLLIQAAELIETGNSVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLRL-----NTTNNTSALSTYNMIFKIGAYKSFSEISPIVQFANF 456
                     789*********************************************998875.....6667889999999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.e 190
                     t+Nqa+le +eg++r+HiiDfdi++G+QW++L+q+L  R++g+psl+iT+++sp+++++ el+ t+++L++fA+e+++ fe++ +  ++l++   
  XP_021280932.1 457 TCNQALLEVFEGCSRIHIIDFDIGYGGQWASLMQELVLRNGGAPSLKITAFSSPSTHDELELSFTQDNLKHFASEINMAFEIERMSLEALSSGsW 551
                     ************************************************************************************86666665523 PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +  L++ ++Ea+aVnl +   + +      +s+ + vL++vk+lsPk+vv  ++ +d+++ sF +++++al+ ys l++sl+a    + ++ +k+
  XP_021280932.1 552 PLPLHLPENEAIAVNLPIGCLSNY------PSALPLVLRFVKQLSPKIVVSLDRGCDRTDVSFPHHIVHALQSYSGLLESLDAV-NMNLDALQKI 639
                     56789999**********777666......555677*********************************************776.4567999*** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Er+ll++ i+++v  ++++     e+  +W++ + ++GF+p+++s+ +++qa++l+++++  g++ve+++ slvl+W++r+L+++SaWr
  XP_021280932.1 640 ERFLLQPGIEKIVLGRHRS----LERTPTWKSLFVQSGFSPLTFSNVTESQAECLVQRTPISGFHVEKRQSSLVLCWQRRELIAASAWR 724
                     **************99998....89999************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 725 aa     Download sequence    
MKAMPLPFEE FQGKGALDFS SSTSSCSDSS LLLQNQHHQQ QEKWQSNKKE GCCYVGSEPT  60
SVLDTRRSPS PTSSSTLSSS LRRSGGGGGS VPPRTPPCGG NPAVSGNKNS QSVDMEGKCG  120
LGMEDWESVL PGSPSQEQSI LRLIMGDIED PSMGLNKILQ SGAGSQDMEF NAGFGLVDQG  180
FAFESIASGG NLVSNNDLPL AGSCSDFTRL GTVSIPTNPV FTSSPSNLLP TPLPPGAFPP  240
QQQQLQPLEA LDEKPQIFNP QVIINQNQAQ FTQNPAMFLP LSYAQLQEHH LLSPPPPKRL  300
NSGSSAPNYQ VPKVPFSGSG QEHYLRRQQQ QLQMPQQRPA TIGMAAAAKP KIVSDELANQ  360
QLQQAIIDLL IQAAELIETG NSVLAQGILA RLNHQLSPVG KPFIRAAFYF KEALQLLLRL  420
NTTNNTSALS TYNMIFKIGA YKSFSEISPI VQFANFTCNQ ALLEVFEGCS RIHIIDFDIG  480
YGGQWASLMQ ELVLRNGGAP SLKITAFSSP STHDELELSF TQDNLKHFAS EINMAFEIER  540
MSLEALSSGS WPLPLHLPEN EAIAVNLPIG CLSNYPSALP LVLRFVKQLS PKIVVSLDRG  600
CDRTDVSFPH HIVHALQSYS GLLESLDAVN MNLDALQKIE RFLLQPGIEK IVLGRHRSLE  660
RTPTWKSLFV QSGFSPLTFS NVTESQAECL VQRTPISGFH VEKRQSSLVL CWQRRELIAA  720
SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-147GRAS family protein