PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GRAS | ||||||||
Protein Properties | Length: 725aa MW: 79194.9 Da PI: 6.3488 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 337 | 3.3e-103 | 367 | 724 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 ++lL+++Ae +++g+ laq +Larl+++ sp g+p+ R+a+yf+eAL+ l + ++s+ s++n++ ++ a+k fse+sPi++f+++ XP_021280932.1 367 IDLLIQAAELIETGNSVLAQGILARLNHQLSPVGKPFIRAAFYFKEALQLLLRL-----NTTNNTSALSTYNMIFKIGAYKSFSEISPIVQFANF 456 789*********************************************998875.....6667889999999*********************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl.e 190 t+Nqa+le +eg++r+HiiDfdi++G+QW++L+q+L R++g+psl+iT+++sp+++++ el+ t+++L++fA+e+++ fe++ + ++l++ XP_021280932.1 457 TCNQALLEVFEGCSRIHIIDFDIGYGGQWASLMQELVLRNGGAPSLKITAFSSPSTHDELELSFTQDNLKHFASEINMAFEIERMSLEALSSGsW 551 ************************************************************************************86666665523 PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285 + L++ ++Ea+aVnl + + + +s+ + vL++vk+lsPk+vv ++ +d+++ sF +++++al+ ys l++sl+a + ++ +k+ XP_021280932.1 552 PLPLHLPENEAIAVNLPIGCLSNY------PSALPLVLRFVKQLSPKIVVSLDRGCDRTDVSFPHHIVHALQSYSGLLESLDAV-NMNLDALQKI 639 56789999**********777666......555677*********************************************776.4567999*** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 Er+ll++ i+++v ++++ e+ +W++ + ++GF+p+++s+ +++qa++l+++++ g++ve+++ slvl+W++r+L+++SaWr XP_021280932.1 640 ERFLLQPGIEKIVLGRHRS----LERTPTWKSLFVQSGFSPLTFSNVTESQAECLVQRTPISGFHVEKRQSSLVLCWQRRELIAASAWR 724 **************99998....89999************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 725 aa Download sequence |
MKAMPLPFEE FQGKGALDFS SSTSSCSDSS LLLQNQHHQQ QEKWQSNKKE GCCYVGSEPT 60 SVLDTRRSPS PTSSSTLSSS LRRSGGGGGS VPPRTPPCGG NPAVSGNKNS QSVDMEGKCG 120 LGMEDWESVL PGSPSQEQSI LRLIMGDIED PSMGLNKILQ SGAGSQDMEF NAGFGLVDQG 180 FAFESIASGG NLVSNNDLPL AGSCSDFTRL GTVSIPTNPV FTSSPSNLLP TPLPPGAFPP 240 QQQQLQPLEA LDEKPQIFNP QVIINQNQAQ FTQNPAMFLP LSYAQLQEHH LLSPPPPKRL 300 NSGSSAPNYQ VPKVPFSGSG QEHYLRRQQQ QLQMPQQRPA TIGMAAAAKP KIVSDELANQ 360 QLQQAIIDLL IQAAELIETG NSVLAQGILA RLNHQLSPVG KPFIRAAFYF KEALQLLLRL 420 NTTNNTSALS TYNMIFKIGA YKSFSEISPI VQFANFTCNQ ALLEVFEGCS RIHIIDFDIG 480 YGGQWASLMQ ELVLRNGGAP SLKITAFSSP STHDELELSF TQDNLKHFAS EINMAFEIER 540 MSLEALSSGS WPLPLHLPEN EAIAVNLPIG CLSNYPSALP LVLRFVKQLS PKIVVSLDRG 600 CDRTDVSFPH HIVHALQSYS GLLESLDAVN MNLDALQKIE RFLLQPGIEK IVLGRHRSLE 660 RTPTWKSLFV QSGFSPLTFS NVTESQAECL VQRTPISGFH VEKRQSSLVL CWQRRELIAA 720 SAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 1e-147 | GRAS family protein |