PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021280645.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 24628 Da PI: 4.624 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 49.1 | 1.1e-15 | 25 | 65 | 20 | 59 |
S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+ XP_021280645.1 25 SCRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 65 579*****9988****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 218 aa Download sequence |
MSFSLHFVPS HLTPSRILTK FHVSSCRGYY RCSTSKGCSA KKQVERCRTD ASMLIITYTS 60 SHNHPGPDLH TTNLTQSPKE TQTDHSDDQY PTPKQQQLPE DPQQEEPEEV QNEPIKTSSD 120 EDASEEHFHY LQSPLSSPRN IIINQEDPFT GNLEKTHDTL GFLLDEEPLS CPHITTSSTP 180 KSEENDFFDE LEELPISSAF TSFMRSKISD EGINVVPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G01250.1 | 2e-18 | WRKY family protein |