PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280611.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | LBD | ||||||||
Protein Properties | Length: 168aa MW: 18846.8 Da PI: 5.0122 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 122.5 | 2.2e-38 | 14 | 111 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C +C+lapyfp ++ +kfa vhk+FGasnv+k+++ ++e++reda+++lvyeA ar+rdPvyG++g i++lq+ +++l +l+ XP_021280611.1 14 PCAACKMLRRRCDGKCILAPYFPCDEIEKFAGVHKVFGASNVIKMIQMVEETNREDAAKALVYEATARIRDPVYGSTGAIFQLQKMVQELTMQLE 108 7********************************************************************************************99 PP DUF260 96 llk 98 ++k XP_021280611.1 109 STK 111 887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MGLEALARAR THQPCAACKM LRRRCDGKCI LAPYFPCDEI EKFAGVHKVF GASNVIKMIQ 60 MVEETNREDA AKALVYEATA RIRDPVYGST GAIFQLQKMV QELTMQLEST KALVLELQQQ 120 KDQLLGILLN VNHIDLLSPI DGGSFSLDYD DSMAYDPAKF PVECDWIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 2e-43 | LBD family protein |