PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021280560.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 370aa MW: 39477.9 Da PI: 6.9004

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021280560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	71.6	1.2e-22	251	313	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL kv++L+ eN +L++e+++l+++++kl+ e+ XP_021280560.1 251 ERELKRERRKQSNRESARRSRLRKQAETEELGHKVESLTVENATLRSEINQLTEKSEKLRLEN 313 89*********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGNNDEGKSS KSDKSSLPVP TDQTNVHVYP DWAAMQAYYG PRVAIPPYYN SAVASGHAPP 60 PYMWGPPQPM MPPYGAPYAT IYSHGGVYAH PAVPLAAAAV ETPTKSLGNS ERGLMKKLKG 120 FDGLAMSIGN GTAENADGGA EPRPSQSAET EGSTDGSDGN TTGTDQTGRK RSREGTPTIA 180 GGDGKNEAKS NAIVPVGEVT ATVSPNSIGT VISPGMTTAL ELRNPTTMNA KSSPTSVPCG 240 VMPSEVWLQN ERELKRERRK QSNRESARRS RLRKQAETEE LGHKVESLTV ENATLRSEIN 300 QLTEKSEKLR LENANLVEEL KHAQLGQAKE IIMNNKDNKE GEIYEKSSNS GAKLHQLLDA 360 SPRADAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGNNDEGKSS KSDKSSLPVP TDQTNVHVYP DWAAMQAYYG PRVAIPPYYN SAVASGHAPP  60
PYMWGPPQPM MPPYGAPYAT IYSHGGVYAH PAVPLAAAAV ETPTKSLGNS ERGLMKKLKG  120
FDGLAMSIGN GTAENADGGA EPRPSQSAET EGSTDGSDGN TTGTDQTGRK RSREGTPTIA  180
GGDGKNEAKS NAIVPVGEVT ATVSPNSIGT VISPGMTTAL ELRNPTTMNA KSSPTSVPCG  240
VMPSEVWLQN ERELKRERRK QSNRESARRS RLRKQAETEE LGHKVESLTV ENATLRSEIN  300
QLTEKSEKLR LENANLVEEL KHAQLGQAKE IIMNNKDNKE GEIYEKSSNS GAKLHQLLDA  360
SPRADAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	274	RRSRLRK
2	268	275	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-88	bZIP family protein