PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280397.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | SBP | ||||||||
Protein Properties | Length: 427aa MW: 46509.6 Da PI: 7.7367 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.6 | 2.3e-40 | 189 | 266 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++ l +ak+yhrrhkvCe+hskap+v+v gleqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk+++ XP_021280397.1 189 RCQVEGCHVALVNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSH 266 6**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence |
MENGGNMFMG NRGQTGNSSI NLAWDIRELN PTSATGFDWG GNNNNTTNGL NLYATSTATT 60 NAAAATRAET TASSCTTLPE VSTAHPLMFL PHHDNATLAH HLNQQHALYT GDGSHTHPDP 120 HLVCLKLGKR HYFEDSTALS DRHVAGGFTI GKKGKPYYNN NLGGGGGGGV GIGPSSSTAV 180 MGPPATVPRC QVEGCHVALV NAKDYHRRHK VCEMHSKAPK VVVLGLEQRF CQQCSRFHVV 240 SEFDDSKRSC RRRLAGHNER RRKSSHHDSA SRNSAQDNKL MTGRFPYLSS PTGRALSLLS 300 SRADSWIFSS DLSSRSSAAL RELIAENRAA ILARQLILDR DWHLHHHAME DLGDAQPGSS 360 SVAVQQHPSL PEPHGWDRFH EAGAQVTLDL MQASSSAFEM LSVRGKTKEE EEECSDLWNS 420 LQGTHVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27370.3 | 8e-37 | SBP family protein |