PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021280339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WRKY | ||||||||
Protein Properties | Length: 352aa MW: 39512.1 Da PI: 5.2988 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.2 | 1.7e-28 | 120 | 181 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ gs+fpr+YYrCt++ gC ++k+v+rs+ed +++e++Y+g+H+++ XP_021280339.1 120 LDDGYCWRKYGQKDILGSNFPRGYYRCTHRhsqGCLATKQVQRSDEDHTIFEVKYRGRHTCN 181 59***************************98999**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MERTMDWEQK TLLNELTQGK QLTNLLRQHL HPSSSPETRQ VLLEKILCSY EKALSMLNWG 60 GFVVETKPTG STLESPASIA NSSLGSGGSD KKDVSKKRKT SSGWTEELRV CSGTSLEGPL 120 DDGYCWRKYG QKDILGSNFP RGYYRCTHRH SQGCLATKQV QRSDEDHTIF EVKYRGRHTC 180 NQVSHFAVTS APVTREMSKE QGNHSRKRQQ LEEKQKQSQE MFMSLGAGLK VKTEELDPRE 240 DIFPSFPFPV ESEEVENSMF ANSLMENEIM GNLSPTFMSP ATSESNYFSV SPCHMGSFGF 300 AQNMQTSESD LTEIISAPTS VTNSPIGDLD ISSLDKLEFD PSFPFDNAEF FS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 3e-46 | WRKY family protein |