PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280105.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 263aa    MW: 28937.1 Da    PI: 9.1914
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.12.2e-392079261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
  XP_021280105.1 20 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79
                    57899*****************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEEMVSNTCT RPMLERKTRP PEQLNCPRCN STNTKFCYYN NYSLTQPRYF CKTCRRYWTE  60
GGSLRNVPVG GGSRKNKRST ISSSSASSAS AKVPDLNPTN LSQFSSQNPK AHKGQDLNLA  120
FPAMQESHGI SQYLQLPKME NNNEQQNYPS SCSTSSPLSA LELLRSGMAS RGLNSFIPAP  180
TPDSNTLYST GFSMQDYKPT LSFSIDTLGN RAGIHGVQEN GGRLFFPFGE MKPISSTNEV  240
DQNKGQGNSA GYWNNGVFGG GSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.48e-73Dof family protein