PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021280104.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 283aa    MW: 31165.7 Da    PI: 9.3535
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021280104.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1252.4e-394099261
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    + ++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s
  XP_021280104.1 40 PPEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 99
                    57899*****************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDAAKWSRVQ GFQDIGLVKP MEEMVSNTCT RPMLERKTRP PEQLNCPRCN STNTKFCYYN  60
NYSLTQPRYF CKTCRRYWTE GGSLRNVPVG GGSRKNKRST ISSSSASSAS AKVPDLNPTN  120
LSQFSSQNPK AHKGQDLNLA FPAMQESHGI SQYLQLPKME NNNEQQNYPS SCSTSSPLSA  180
LELLRSGMAS RGLNSFIPAP TPDSNTLYST GFSMQDYKPT LSFSIDTLGN RAGIHGVQEN  240
GGRLFFPFGE MKPISSTNEV DQNKGQGNSA GYWNNGVFGG GSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.41e-79Dof family protein