PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279743.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 305aa    MW: 33799.9 Da    PI: 8.1081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.53.1e-34155212259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt+++C+vkk+vers +dp++v++tYeg+H+h+
  XP_021279743.1 155 EDGYRWRKYGQKAVKNSPFPRSYYRCTTTSCNVKKRVERSFSDPSIVVTTYEGQHTHP 212
                     8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MERKEGVKME DVVGNSSPFS DYIANSFPLQ SIFDLSEGEK MPLGFMELLG VQDLSSTPLF  60
DIAQQVPSLA TQLPNPTSTK IESPSEVFNQ PATPNSSSIS SASSEAVNDD PVKGVDQEED  120
QQKNRKQLKP KKTNQKRQRE PRFAFMTKSE VDHLEDGYRW RKYGQKAVKN SPFPRSYYRC  180
TTTSCNVKKR VERSFSDPSI VVTTYEGQHT HPSPVIPRPS LGGSHLTPGI SAGAAATFGM  240
PMQRTPSHYQ QPFGNGLSPL SFGHNGSNIN ASFLHERRFC TPGASLLKDH GLLQDIIPSH  300
MLKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.11e-70WRKY family protein