PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021279718.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 200aa    MW: 22365.3 Da    PI: 9.5941
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021279718.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.89.5e-33121179159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+
  XP_021279718.1 121 LDDGYRWRKYGQKAVKNSNYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHP 179
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDGQESNQAP VPPPAPPLFS GPFNSPFLFA APSLPSSSSS SSLHPPLETQ ILPDIDWVSL  60
LSGQGVLGEN KPIIESAASL MAENGADQDE KGNKDKRKGS RIKKTSRPRF AFQTRSADDI  120
LDDGYRWRKY GQKAVKNSNY PRSYYRCTHH TCNVKKQVQR LSKDTSIVVT TYEGIHNHPC  180
EKLMETLTPL LKQMQFLSRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.19e-59WRKY family protein