PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021279389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | WRKY | ||||||||
Protein Properties | Length: 605aa MW: 65800.7 Da PI: 7.0656 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.5 | 1.3e-33 | 259 | 316 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_021279389.1 259 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 316 8****************************************.***************85 PP | |||||||
2 | WRKY | 106.6 | 1.3e-33 | 431 | 489 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_021279389.1 431 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 489 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence |
MASSCSSLDT SANSHPQNAF SFSAHPFMTT SFSDLLASGG ADDENPSATF DGGVDAKRGG 60 GGGLSLSDRI AERTGSGVPK FKSLPPPSLP ISPPPVSPSS YFAIPPGLSP AELLDSPVLL 120 NASNILPSPT TGTFPAQAFN WKSNSGNNQQ NVKQEDKSYS NFSFQTQPRP ATSSSSMFQS 180 STNTIQTAQQ QAWSFQESVK QEDFSSGNRM VKPEYTQMQS FSPEIANIQG NSQSNSGFQS 240 NYSNFQQQPQ SIRENRRSDD GYNWRKYGQK QVKGSENPRS YYKCTFPNCP TKKKVERSLD 300 GQITEIVYKG SHNHPKPQST RRSSSSSSST IAIQTSNAAS AEIPDQSFAT HGSGQMDSVA 360 TPENSSISVV DDDFDQGSQK SKSGGDEFDE DEPEAKRWKS EGENEGISAP GSRTVREPRV 420 VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTHP GCPVRKHVER ASHDLRAVIT 480 TYEGKHNHDV PAARGSGSHS VNRPLPDNNN NNNGNNNAAM AIRPSAVNNH SNHSVTNSLH 540 SLRPAAAEGQ APFTLEMLQG TGNFGFSGFG NSMGSFMNQP QHVNNMFSRT KEEPRDEVFI 600 ESLLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 1e-111 | WRKY family protein |