PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021279247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 197aa MW: 21656.8 Da PI: 6.1186 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 27 | 49 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ Fs+ L H++ H XP_021279247.1 27 YECTFCKRGFSNAQALGGHMNIH 49 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
METDQPAPEN PDQGSPDDQR TSPARSYECT FCKRGFSNAQ ALGGHMNIHR RDKAKLKQAS 60 SPGETTQQSL DIVPKIIPSS YSPNHPSCTT VLQPRADAKS SQEIRSSPGK WPWVIQGDDD 120 ADKRDKTHVG EIRQLPLFDE KPSTTDQNYP SSQVQGGIGK GISSSQWSSG SDQLDLELRL 180 GPEPQDSSPT MTTKKFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53820.1 | 9e-18 | C2H2 family protein |