PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278578.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family GRAS
Protein Properties Length: 690aa    MW: 78294.2 Da    PI: 5.9845
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3497.8e-1073176863374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL +cA+ v+  d+++a++lL +++ ++sp gd ++Rla+yf+++L+ rl +++  ly  +p++ t     s+ l+a+ l++ ++P+ ++s+l 
  XP_021278578.1 317 SLLSQCAQDVAIYDQRAATELLGKIRRHSSPFGDGTERLAHYFANGLEVRLKGTGAPLYTPIPSNGTL---ASDILKAYILYVSACPFRRISNLF 408
                     799********************************************************888887776...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I + +e++++vH iDf+is+G+QWp+L+q L++R++gpp+lRi g++ p++g   +e++e+tg+rL++ +e+++vpfe+n+ +akr+e ++
  XP_021278578.1 409 ANRNIAKLAEKATTVHLIDFGISYGFQWPCLIQRLSTRRGGPPKLRISGIDFPQPGfrPAERIEATGRRLRRCCENVDVPFEYNA-IAKRWEFVR 502
                     *******************************************************9*****************************.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+++++E ++Vn++++l +l+d+sv l+s+r+ vLkl+k+++P+++++   + ++n + F++rf ea+ ++sa+fd+lea++pre+ +r  +
  XP_021278578.1 503 VEDLKIERDELIVVNCMYRLRNLPDDSVVLNSPRNIVLKLIKRINPDLFIHGVVNGSYNVPFFVTRFREAFFHFSAIFDMLEANVPREDPDRLLL 597
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     Ere++gr+++nv+a eg er+ r et+++W+ r ++aGF++++l++k  + a+++++  + + + +e + +++++gWk+r + ++S+W+
  XP_021278578.1 598 EREMFGRDVMNVIAYEGLERIDRPETYKQWQFRNQKAGFRQLRLDQKLLNRARAVMKSNYHEDFAIEVDGQWILQGWKGRVIHALSCWK 686
                     ************************************************************999*************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MDTLLQNNGS EVVILNQNPV DGSNPSNILV DPAKSNHPGH VASSVGSNSS DGDSPYGGDN  60
LDFSDAVLKF INDVLMEEDV EGRPCMLQDC LALQAAEKSF YDVLVQKYPP LPDHFHQDID  120
VDNVCPYDPV ICSNRADGND SQAAANNMVE SSWNYHQHGL DSPLMQSSSN YTTELSSYLP  180
RLCGEILPSE SVESNTFKLP ELQKGVEDRE AEKEVWKHIS HGSMGRKNHP REFEDSLEET  240
RNNKQFALIT EEDSSEEHVF DEVFLVKGGN VSCPLYEASQ NRANRTLQDS GQVKGDSSRK  300
SRAKKQGNGK EMVDLWSLLS QCAQDVAIYD QRAATELLGK IRRHSSPFGD GTERLAHYFA  360
NGLEVRLKGT GAPLYTPIPS NGTLASDILK AYILYVSACP FRRISNLFAN RNIAKLAEKA  420
TTVHLIDFGI SYGFQWPCLI QRLSTRRGGP PKLRISGIDF PQPGFRPAER IEATGRRLRR  480
CCENVDVPFE YNAIAKRWEF VRVEDLKIER DELIVVNCMY RLRNLPDDSV VLNSPRNIVL  540
KLIKRINPDL FIHGVVNGSY NVPFFVTRFR EAFFHFSAIF DMLEANVPRE DPDRLLLERE  600
MFGRDVMNVI AYEGLERIDR PETYKQWQFR NQKAGFRQLR LDQKLLNRAR AVMKSNYHED  660
FAIEVDGQWI LQGWKGRVIH ALSCWKPVQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein