PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278455.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family SRS
Protein Properties Length: 358aa    MW: 36824.6 Da    PI: 8.3471
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702223.54.3e-691372963153
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                     s +a+CqdCGnqakkdC+h+RCRtCCksrgfdC thvkstWvpaa+rrer+ + aaa++ a +s +++ +k++r   +++++++s+t++s+++++
  XP_021278455.1 137 SSGATCQDCGNQAKKDCTHRRCRTCCKSRGFDCPTHVKSTWVPAARRRERMLMVAAATAGAGSSGSTSGAKKPRLI-TSQTTTTSHTSTSNTTPP 230
                     56789*********************************************************999********986.88899999********** PP

          DUF702  98 keletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     ++++tss          lP +v+++avf+cvrv++v+dge+e+aYq++v+igGhvfkG+LydqG+e
  XP_021278455.1 231 RSFDTSSshqdagfkesLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVE 296
                     *****999********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGMVGLRDVF VVAPASSFNH HHHHHHHHTQ DPIMANDQIN GQNASTALGV GVGVGVIPLL  60
TATPCLAPQN MEDSDLLSNN GRNKLSGMQL WQNQNSSSHY LKKPSSVPDN NNSSSMNLIQ  120
SSGGGGMGGG SGGSGSSSGA TCQDCGNQAK KDCTHRRCRT CCKSRGFDCP THVKSTWVPA  180
ARRRERMLMV AAATAGAGSS GSTSGAKKPR LITSQTTTTS HTSTSNTTPP RSFDTSSSHQ  240
DAGFKESLPG QVRAPAVFKC VRVTAVEDGE DEYAYQAVVK IGGHVFKGFL YDQGVEGREG  300
FPNISELHLG GGGGAGGGGG GSGRNGGSSS SPVLDPSEVY AATGGGLLAG SSYGNPIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.13e-76SRS family protein