PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278451.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NF-YB | ||||||||
Protein Properties | Length: 152aa MW: 17313.5 Da PI: 5.9439 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 47.7 | 3.7e-15 | 9 | 102 | 6 | 94 |
NF-YB 6 rflPianvsrimkkvlPa.....nakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 ++lP a v r++k+ l + + kda e + fi ++++ a+d c++ +r+tin++d++ al ++ f ++v+plk+ l+++r + XP_021278451.1 9 EELPKAIVRRVVKEKLSDcspdyDINVHKDALLAFTESARIFIHYLSATANDICKESRRQTINAEDVFKALEEIEFSEFVKPLKASLAEFRRKN 102 6799*********999652222256899**************************************************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
MEKVVPEAEE LPKAIVRRVV KEKLSDCSPD YDINVHKDAL LAFTESARIF IHYLSATAND 60 ICKESRRQTI NAEDVFKALE EIEFSEFVKP LKASLAEFRR KNAGKKGAAT KEKEVKKKRK 120 VEEPSGKSGS KSKQNKGEDD NEEEREEEEE GR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 99 | 120 | RRKNAGKKGAATKEKEVKKKRK |
2 | 111 | 120 | KEKEVKKKRK |
3 | 116 | 121 | KKKRKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 6e-48 | NF-YB family protein |