PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | C2H2 | ||||||||
Protein Properties | Length: 290aa MW: 31060.6 Da PI: 4.5118 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.8e-05 | 264 | 287 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_021278311.1 264 FSCGSCNKSFGSEGGLESHKKAkH 287 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MEFWGIEVKA GKPIKADPGA NHVIHLSQAT LGESKNKAES VTLHVNADGQ KLVLGTLSHQ 60 NFPQLSFDLV FDQEFELSHN CKHGSVYFLG YKTFVPEEGD DEFDMSSDEE SSEDEELPVA 120 AAENGKAKTD VKPSKVNAGK PDALKQAVKI EEPSNNKKTE DDDESDSEDE SGSDEEDDSE 180 DEDESDEMSM DESSDDEDEG TPKKVEASKK RPAEAATPVS AKKAKSAATP QKTDDKKGGH 240 TATPHPSKQA GKSSAKSPKS GGQFSCGSCN KSFGSEGGLE SHKKAKHGGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 5e-36 | C2H2 family protein |