PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278244.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family Dof
Protein Properties Length: 319aa    MW: 34271 Da    PI: 9.6445
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.76.1e-3963123262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nkk++
  XP_021278244.1  63 PEVALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNK 123
                     56789*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVFSSVPVYL DPPNWQQTNH IQQGTGSENP QLPPPPHHVG VGAGSIRPGS MADRARLAKI  60
PQPEVALKCP RCESTNTKFC YFNNYSLSQP RHFCKTCRRY WTRGGALRNV PVGGGCRRNK  120
KNKSSSSKSS ASAEKQVGNS NSTSAGNIPS EISGHLPRQT PHLPFMASLQ NFSQYGLGNI  180
GLNFGGIQGQ IGATSTGASG QADMGFQIGT NSGMSSAIFS AEGTHHQQFP FFEPANGLYP  240
FQSEGMEASS SMVGESQLLR SMSSSSRASQ TAPVKMENNQ GLNLSRQLLG VSENNQYWGG  300
NNWTDNLSGL NSSNTNHLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.13e-48Dof family protein