PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021278199.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | E2F/DP | ||||||||
Protein Properties | Length: 466aa MW: 52067.1 Da PI: 4.4742 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87 | 1.4e-27 | 147 | 212 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_021278199.1 147 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 212 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MSGSQASEQL KQSMQQQQQQ LQNQQQLKRQ LPFSMKPPFM APGGDYHRFP STEPRRIADQ 60 DAEAIVVKSP LKRKSDIADR EVESSEWTMP PGYTEVVSSP LQTPVSGKGG KAQKTSRLTK 120 SSKAGPQTPA SNLGSPGNNL TPSGPCRYDS SLGLLTKKFI NLIKQAEDGI LDLNKAADTL 180 EVQKRRIYDI TNVLEGIGLI EKKLKNRIQW KGLDVSRPGE VDENVATLQA EVENLSIEER 240 RLDEQIREMQ ERLRDLSEDE NNQKWLFVTE EDIKNLPCFQ NETLIAIKAP HGTTLEVPDP 300 DEQAVDYPQR RYRIVLRSSM GPIDVYLVSQ FEEKFEEIQG VDPPPNFPST SGLNENPGTT 360 MVMEESRGKE IETQGQDTNR MCSDLNASQD FVSGIMKIVP SDVDSDADYW LLSDPSVSIT 420 DMWRTEPEVG WNEFGTLHDE DYGMGAVSTP RPQTPPSNAA EVPSAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 1e-175 | E2F/DP family protein |