PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278172.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 359aa    MW: 40187.4 Da    PI: 5.4201
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-29129189259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++dp+++e+tY+g+H++ 
  XP_021278172.1 129 DDGYSWRKYGQKDILGAKYPRSYYRCTYRntqNCWATKQVQRSDDDPTIFEVTYRGTHTCA 189
                     8***************************98899*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MEHGWNWEQE TLIGELVQGM ELAKQLRVYL GTASSVESRD LLVQKILSSY EKALLILKMN  60
RPVGQPQQNX GATSGVPESP LSINGSPRSD DLEKDNQDIR DVSKKRKMLP RWTDQVRVSS  120
ESLLEGPHDD GYSWRKYGQK DILGAKYPRS YYRCTYRNTQ NCWATKQVQR SDDDPTIFEV  180
TYRGTHTCAL GNQAAVPPPA SPEKQEHKSN NLNYNNNQRL QSQDILLNFR KGLRVNTEGL  240
DNKGMAPSFS FPSSSFGCLQ SENHTSSPSG VLDNNNILGS FSSPFMSPAT PELNYFPVSH  300
SQMNNLGGIL DERHAESVLT ELISANTSAT NSPIMDLDFS LDHVELDPNF PFDTPGFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-73WRKY family protein