PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021278000.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 278aa    MW: 30967.5 Da    PI: 7.1302
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021278000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-183181155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    s++ GVr+++ +g+WvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_021278000.1 31 SKFVGVRQRP-SGKWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 81
                    79********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MEHRVERQQK GVSSDKHGKF KERIANNISR SKFVGVRQRP SGKWVAEIKD TTQKIRMWLG  60
TFETAEEAAR AYDEAACLLR GSNTRTNFAT HVPSNSHLSS KIRNLLDHKK GLRQGNSATN  120
SKKTTIKANT ILSSNSSSSS NASSNDSFLS NSGDDSFLAC NSMKQDIQIF DGAYRPDMSY  180
RIGELEPATS QFGQSWPIST GFDQIPLNQQ GVQLPQTLGP LSNAIDPELL EFERLKVERQ  240
IAASLYAMNG VDEYLESEFD LGDILWDLPT HSQLFCPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-53ERF family protein