PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277856.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NF-YA
Protein Properties Length: 323aa    MW: 34861.3 Da    PI: 8.8236
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.32.2e-32173229158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  k rkpylheSRh+hA+rR+RgsgGrF
  XP_021277856.1 173 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VKVRKPYLHESRHQHAMRRARGSGGRF 229
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MQSKSEGGSR LERDLHGVPP TAVYSEPWWR NIGYSTISPG VRGGNTSNSS SMECPNGSES  60
NDGRSLSNGG VNEEDDGNKE TQTTASSQSV RNGGQEHHNL QHVASTMPAM RDECLTQPPQ  120
LELVGHSIAC ASNPYQDPFY GGMMAAYGHQ PLGYPPFVGM PHARMALPIE MAQEPVYVNA  180
KQYQGILRRR QARAKAELEK KVVKVRKPYL HESRHQHAMR RARGSGGRFA KKSDADTSRK  240
GTGSGPALSY QSASSSGSEP LPADSAETWN SSFSQQEARG SQVHDTHHVN GSGHYQNRGG  300
SISSPGFTQA SCYPVNGGHP LKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.11e-79NF-YA family protein