PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021277768.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

G2-like

Protein Properties

Length: 357aa MW: 38581.3 Da PI: 5.1907

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021277768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95	5.9e-30	172	225	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_021277768.1 172 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 225 59*****************.******************************8 PP
2	Myb_DNA-binding	48.1	2.6e-15	174	224	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vd+v+ lG + +ktI++ m+ +g+t++++ s++qky+ XP_021277768.1 174 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 224 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGEEVNMSEY EANGGEDEQV TATATATAAV VDDDDDDDDE RVIEWEMGLP NTDDLTPLSQ 60 SLIPPELASA FSISPEPRRT TLDVNRASHS TLSSLRSIGA HSCTTNNNNN NNDNNFRSFN 120 DPMVGEPEGD GSGSGSGSDS KKMRKMDIAE EADSAVRTTE NSEDPSARTL KRPRLVWTPQ 180 LHKRFVDVVA HLGIKNAVPK TIMQLMNVEG LTRENVASHL QKYRLYLKRM QGLSNEGPSS 240 SDQLFASTPV PQSLHEGGSG GGGGSGGGGS ANGNGHMGMA ISMPYGAPMM PMPMPMYGHV 300 GMHQAGYLHH HQQQHHHQNG YEANPYGIIQ RSDWSGGNNY GSVVSYPHHM APNDKLN

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGEEVNMSEY EANGGEDEQV TATATATAAV VDDDDDDDDE RVIEWEMGLP NTDDLTPLSQ  60
SLIPPELASA FSISPEPRRT TLDVNRASHS TLSSLRSIGA HSCTTNNNNN NNDNNFRSFN  120
DPMVGEPEGD GSGSGSGSDS KKMRKMDIAE EADSAVRTTE NSEDPSARTL KRPRLVWTPQ  180
LHKRFVDVVA HLGIKNAVPK TIMQLMNVEG LTRENVASHL QKYRLYLKRM QGLSNEGPSS  240
SDQLFASTPV PQSLHEGGSG GGGGSGGGGS ANGNGHMGMA ISMPYGAPMM PMPMPMYGHV  300
GMHQAGYLHH HQQQHHHQNG YEANPYGIIQ RSDWSGGNNY GSVVSYPHHM APNDKLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46640.2	2e-80	G2-like family protein