PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021277727.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family WRKY
Protein Properties Length: 333aa    MW: 35953 Da    PI: 10.0121
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021277727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31257314359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp+++++tYegeH+h+
  XP_021277727.1 257 DEFSWRKYGQKPIKGSPYPRGYYKCSTIrGCPARKHVERASDDPSMLIVTYEGEHRHS 314
                     99***********************9877****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MAVDLMSFPK MDDQIAIQEA ASQGLTSMEH LICLLSHQSN QVXCTDLADL TVSKFKKVIS  60
LLNRTGHARF RRGPIQSSSS SSSPSSSSAS LTVPNPHKTL ALTPAQVATP VSAPVITPAS  120
FVQSQPNSLT LDFTKPNLFS SKTKSTELEF TKESFSVSSN SSFMSSAITG DGSVXNGKQG  180
SSLFLAPAPA VSAGKPPLSS XPYKKRCHEH DHSEDVSGKF SGSGNGKCHC SKRRKNRVKK  240
VIRVPAISSK IADIPPDEFS WRKYGQKPIK GSPYPRGYYK CSTIRGCPAR KHVERASDDP  300
SMLIVTYEGE HRHSQPAMQE NVAPGVGLLF EST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.11e-134WRKY family protein